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INTRODUCTION


Integrative Biology Division specializes in basic research aimed at generating knowledge in the fields of genetics, cell biology, molecular biology, biochemistry and physiology for plants of agro-industrial interest or those native to the Yucatan Peninsula.

It also develops new methodologies in these fields, emphasizes the training of highly-qualified researchers. In addition to generating basic knowledge, projects such as those focused on coconut and somatic embryogenesis of coffee generate different applications for use in processes.

Mission


Perform basic-level research in plant biochemistry, molecular biology, cell biology, genetics and physiology in models of agricultural and/or industrial interest and/or those native to the Yucatan Peninsula.

Train highly-qualified researchers, and publish research results in high-impact national and international journals.

Vision


The researchers of this Division will be nationally and internationally recognized as among the best in basic research in plant experimental biology, and will regularly publish their work in the most relevant and highest impact journals in their disciplines.

Doctoral student graduating from this Division will be independent researchers fully capable of joining prestigious research institutions both in Mexico and abroad.

RESEARCH AREAS


1. PLANT GENETICS

Knowledge of plant genetics is essential to genetic improvement, germplasm production and maintenance, and cytogenetics, among other areas. Employing modern molecular biology methodologies in conjunction with genetics allows us to optimize plant genome research. We apply these methodologies to study chromosomal number, genetic variation at different levels of DNA organization, abnormalities in mitosis and meiosis, as well as mutations and alterations in genetic material. These help us to understand natural populations, germplasm banks, progeny and tissue cultures, which are essential to maintaining, conserving and improving commercially important crops.

Research Topics:

  • Molecular Markers.
  • Creation and application of tools for genetic improvement.

RESEARCHERS

2. PLANT-ENVIRONMENT INTERACTION

Plants are sessile organisms and have biochemical and molecular mechanisms that regulate their physiological functions. These mechanisms allow perception of biotic and abiotic environmental factors such as light temperature, humidity, nutrients, and the presence of other living things.

Research in the Plant-Environment Interaction Division focuses on the effects that the environment’s physiological and pathological nature exert on important metabolic events such as signal transduction, gene expression, synthesis of specific proteins, root morphology and architecture, and secondary metabolite production, among others. The results clearly contribute to overall understanding of the plant-environment interaction, but knowledge of the mechanisms regulating these interactions can help to design improvement programs for important agro-industrial crops such as coffee, habanero pepper, tomato, banana, etc.

Research Topics:

  • Environmental toxicity (aluminum).
  • Nutrient balance (nitrogen, potassium, sodium).
  • Water stress (drought).
  • Pathogen identification.
  • Cloning of defense genes.
  • Generation of resistant plants.

RESEARCHERS

3. SECONDARY METABOLISM AND METABOLIC ENGINEERING

Plants cells have primary metabolic routes that are involved in formation of the precursors required for development. They also produce other compounds that, although not linked to basic functions, confer adaptive advantages. Known as secondary metabolites, they include alkaloids, carotenoids and phenols, among others. Considered metabolic aberrations until recently, secondary metabolites form part of the secondary metabolism, which consists of strictly controlled pathways, highly specific enzymes and closely regulated connections to the primary metabolism.

Secondary metabolites have myriad industrial applications as pharmaceuticals, aromas, etc. Research in the Secondary Metabolism and Metabolic Engineering Division involves plants that produce secondary metabolites with potential commercial uses. It focuses on understanding how the routes in secondary metabolite formation function, the factors that affect these metabolites and development of use strategies.

Research Topics:

  • Pigment synthesis regulation.
  • Nitrogen metabolism.
  • Capsaicin accumulation.

RESEARCHERS

4. MORPHOGENESIS AND GENE REGULATION

Genetic regulation is the process that controls genetic information. Using molecular biology and microscope techniques, this Division concentrates on how this information is controlled in multicellular organisms. For example, the study of development and morphogenesis utilizes the fact that in plants somatic embryos can develop from competent individual cells, although the origin of competent cells remains unclear. It is generally believed that some cells become competent when explants are cultured in the presence of hormones. Once formed, somatic embryos use the same developmental mechanisms as zygotic embryos. Plant somatic cells have the genetic information needed to create a complete and functional plant, and gene expression is regulated to allow differentiation of the organs in a plant identical to its parent. Induction of somatic embryogenesis is therefore a consequence of replacement of tissue cell genetic expression patterns with genetic-embryogenic expression patterns. Though this complex process has been studied extensively, why it occurs and the mechanisms that regulate it still require study.

Research Topics:

  • Germplasm banks.
  • In vitro culture of plant tissues.
  • Transcriptional regulation.

RESEARCHERS

Staff


RESEARCHERS

TECHNICIANS

  • Adolfo Alberto Guzmán Antonio, EdD.
  • Ángela Francisca Kú González, EdD.
  • José Armando Muñoz Sánchez, EdD.
  • Ligia Guadalupe Brito Argáez, MSc.
  • Lucila Aurelia Sánchez Cach, MSc.
  • María de Fátima Medina Lara, MSc.
  • Miguel Alonso Tzec Simá, MSc.
  • Ramón Armando Souza Perera, MSc.
  • Yereni Minero García, MSc.
  • Adriana Canto Flick, MSc.
  • Elidé Avilés Berzunza, MSc.
  • José Roberto Kú Cauich, MSc.
  • Lizbeth Arianelly Castro Concha, MSc.
  • Luis Carlos Gutiérrez Pacheco, MSc.
  • Margarita de Lourdes Aguilar Espinosa, MSc.
  • Miriam del Socorro Monforte González, MSc.
  • Rosa María Galaz Avalos, MSc.
  • Wilma Aracely González Kantún

CICY

Welcome

The Yucatan Scientific Research Center (Centro de Investigación Científica de Yucatán - CICY) is a public research institute associated with the National System of Public Centers of the Ministry of Science, Humanities, Technology and Innovation (Sistema Nacional de Centros Públicos de la Secretaría de Ciencia, Humanidades, Tecnología e Innovación (Secihti)). Its primary purpose is basic and applied research in biology, materials and other related areas, with an emphasis on solving national, regional and local problems. The Center’s mission is to carry out scientific research, develop human resources, distribute knowledge, generate and transfer technology, and promote environmentally harmonious development in society.

RESEARCH DIVISIONS


CICY GRADUATE PROGRAMS

Graduate degrees are available in the following areas:

  • Biological Science (M.Sc. + Ph.D.)
  • Renewable Energy (M.Sc. + Ph.D.)
  • Materials Science (M.Sc. + Ph.D.)
  • Water Science (M.Sc.)

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HIGHLIGHTS

  • Botanical Garden

    A botanical garden permanently exhibits collections of living plants organized following scientific criteria, with explanatory text and name labels. Botanical gardens are an important element in basic and applied scientific research, natural resources conservation, environmental education, science outreach and recreation. They have been valuable resources since ancient times, and have served diverse functions, depending on users’ needs and interests, cultural patterns and floristic resources. Initially reserved for rulers, kings and emperors, in the Middle Ages they became valuable for the teaching and practice of medicine. Colonial powers used them to begin immense plantations of introduced species in conquered countries, and now they are used to introduce new horticultural and agricultural species and varieties, as well as for scientific research. Worldwide, there are approximately 2000 botanical gardens which support horticulture and agronomy, and are active in conserving biodiversity and ecologic processes at the local and planetary scales.

    Roger Orellana Regional Botanical Garden

    Founded in 1983, the CICY’s botanical garden is “regional”, meaning that its collections are largely from the flora of the Yucatan Peninsula. Its collections have supported conservation of regional vegetal resources, both through direct preservation and research. Activities at the garden publicize the value of regional flora, and promote specific conservation initiatives. Declared a “Living Plants Museum” by the federal government, it is also recognized as a “Center for Wildlife Management and Conservation” (SEMARNAT-UMA-JB-0039-YUC-02). The garden is a member of the Mexican Association of Botanical Gardens (AMJB), the Latin American and Caribbean Association of Botanical Gardens (ALCJB) and the International Organization for Conservation in Botanical Gardens (BGCI). With almost 38 years in existence, its collections, and the research, conservation and educational activities they support, have made it part of the region’s cultural and biological heritage.

  • Gembio Lab

    Founded in 2006, the GeMBio Laboratory specializes in molecular analyses for biological research. It forms part of the Mexican Phytosanitary Laboratories Network, which is approved by the federal Ministry of Agriculture and certified by the Mexican Accreditation Institute (EMA). GeMBio is currently the only laboratory on the Yucatan Peninsula to be a member of the International Laboratory Accreditation Cooperation (ILAC) for plant health conditions. The laboratory is dedicated to using applied phytopathology to contribute to regional and nationwide plant health. It is renowned for phytopathogen diagnosis, detection of genetically-modified organisms, design of integrated pest and disease management strategies, creation of new protocols, and molecular research on plant biodiversity and microorganisms.

  • Herbarium

    The CICY herbarium collection currently comprises over 46,000 mounted specimens, with 3,000 to 5,000 more being processed. Over 75% of the collection is from the Yucatan Peninsula, the remainder being from the states of Tabasco, Chiapas and Oaxaca, and from other areas in Mesoamerica. It is by far the largest, best curated and documented collection of flora from the Yucatan Peninsula Biogeographic Region. The herbarium has exchange agreements with several national and international institutions, and constantly receives visitors from within the CICY, as well as from Mexico and all over the world. The Natural Resources Division has several projects in progress at involve the herbarium, highlighting its importance to graduate student research at the CICY.

  • Library

    The CICY library provides a full spectrum of research and academic services to internal and external users. There is an extensive and current collection of physical books, reports and periodicals. Library staff are always available to assist users in searching and browsing library resources, including its extensive access to online resources.

    The CICY subscribes to numerous international publishing services. For more information consult the CICY website: www.cicy.mx. Following is an example of services:

    • Thomson Gale and Thomson Reuters databases (includes Academic OnFile, Science Citation Reports, Current Contents, Journal Citation Reports and Derwent Innovations)
    • Cambridge Scientific Abstracts databases (includes Agrícola, Polymer Library, ASFA, Environmental Sciences & Pollution Management, Plant Science and Water Resources Abstracts).
    • Knovel (provides access to 256 titles on chemistry, polymers and materials science)
    • Annual Reviews (access to 42 titles)
    • Blackwell (access to over 800 titles)
    • Royal Society of Chemistry (access to 21 titles)
    • Springer (access to over 1500 titles)
    • J-STOR (access over 600 titles)
    • SWETSWISE (access to 23 electronic titles)
    • EBSCOHOST (access to 24 electronic titles)
  • Metrology

    The CICY Metrology Laboratory provides industrial and scientific instrument calibration, training courses and preventive maintenance for business, industry and laboratories. It is accredited by the Mexican Accreditation Institute (EMA) for measurements of mass, volume, temperature, flow, optics and pressure. Because the EMA forms part of the International Laboratory Accreditation Cooperation (ILAC), CICY Metrology Laboratory results are valid internationally. The measurement services offered include, but are not limited to:

    • Mass.- From 100 mg to 1000 kg
    • Volume.- In graduated flasks and storage tanks from 1 to 30,000 liters
    • Temperature.- from -30 °C to 800 °C
    • Flow.- From 5 to 3000 liters/min
    • Optics.- Spectrophotometry, absorbance and transmittance
    • Pressure.- Manometer calibration from 21 up to 68,948 kPa
  • Scanning Electronic Microscopy

    The CICY has a JEOL JSM6369LV scanning electron microscope for counting, sizing, fingerprinting and mapping samples for materials science and biological research. In addition to standard SEM imaging for metals, ceramics, polymers, etc., it can image biological materials using a low vacuum mode. The equipment has a backscattered electron detector, a secondary electron detector, energy X-ray dispersion, cooling stage, image analysis techniques, bacterial identification and particle sizing. Services are available to the public upon request.

CICY